Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935906.1_cds_XP_016481593.1_72891
CDS Infomation

[gene=LOC107802577] [db_xref=GeneID:107802577] [protein=uncharacterized protein LOC107802577 isoform X11] [protein_id=XP_016481593.1] [location=join(49604..51282,51379..51454,52414..52567,52673..52732,52818..52994,53872..53903)] [gbkey=CDS]
Sequence

ATGAGGCACCCAACTGATTCAATAGCGTGGAAAACGTTTGATGAACTTCATCAATCTTTT
GCATCCGAGCCTCGTAATGTTCGACTTGGACTTGCTAGCGATGGTTTTCAATCATTTGGA
AATTCCAAAACTCCATATAGCATTTGGCCTGTGGTACTTATTCCTTATAATTTACCACCT
TGGCTATGCATGAAGAAAGAAAATTTTATTTTGTCGATGATTATTCCTGGTCCTGAGAGT
CCTGGAGATGCTATTGATGTCTATCTCCAGCCTTTGATAGAAGAATTAAAGGAATTGTGG
GAATCTGGAGTGAAGACCTTTGATGCGTCAACTAAACAAAACTTTGTGTTACATGCATCT
TTATTATGGACCATTAATGACTTTCCCGCCTATGCAAATTTGTCTGGATGGAGTACAAAG
GGAAAATTAGCGTGCCCATGCTGCAATAAAGAAACTCACTCAATTAGGTTGCAAAATTGT
AAAAAACAGTGTTATATGGGCCATAGACGCTTTCTTCCTCTTAATCACAAATGGAGGAAT
GATAAAGCATCATTTAATGGCACTAAGGAGAAAAGATTACCACCAAAACAGTTGTCTGGT
GATGATATACTTGATCAAGTGGCTGATTTATATGGGTTACAACTAACAAAGGATCCAAAG
AAGAAGATTAAAATATCACATGAGAGTAGGGGTGATAATTGGAATAAGAAGAGTATTTTC
TTTGATCTCCCATATTGGAAAGCTCTTTTATTGCGGCATAACTTAGATGTAATGCACATT
GAGAAAAATATATGTGATAATATTTTGGGGACAATCTTAAATATCAAAGGAAAAACCAAA
GACACCATAAACACTCGGTTGGATTTGCAAGCAATGAACATTAGGAAAGAATTGCATCCA
ATAAAAATTGGGGATAAATATGACTTACCAACGGCATGTTACACATTATCTCCCGAAGAG
AAGGACAGGTTTTTCAGTTTCTTGAAGAACTTAAAGGTTCCAGACGGATTTTCATCAAAT
ATTTTCCAGTGTGTCAACCTTAAAGATCGCAAAATTTCTGGTTTAAAAAGTCATGATTGC
CATGTTCTTCTACAACATTTACTCCCACTTGCTCTACGGGGCATGCTATGCAAATCTGTG
TGTGAACTGCTTATTGAGTTGTCTTTATTTTTCAACGTACTTGGATCGAAATGTTTAAGT
GTGGATGAATTAGAGCAGATAGATGCCCAAATCCCAATAACTGAGTGCAAGCTAGAAAAA
GTCTTCCCTCCTACATTTTTTGATGTCATGGAGCACTTGCCAATTCATTTAGCTAATGAA
GCTAAGATTGCTGGACCTTCTCAATATCGATGGATGTATCCAATGGAGCGATATATTTAC
TTTATAAAACCATTTATTCGTAATAGGGCTTGTGCAGAAGGTTCTATTGCAGAGGGATAT
TTAGCAACTGAATGTATGACCTTATGTTCAAGATATATACATACAATGGAAACAAAGTTT
AATCGTCTTGAACGAAATTATGATGGTGGTATTATAGAATCTGATGGAGGTTTAACAATT
TTTTGTCATCCCGGAAGAGCTTTAAGAGATGGCAAACCACACAAACCTGATTCAAATGAA
CTGGAGCAAGCACATATTTATATTTTGAAGAATTGTGATGAAATTCAACCATTTCTCGAA
AAGTTTTCATTAACTCCAATTGATACCTCTCAAGAAAATTCTGATATGCAATTCATTGGT
TGGTTAAAAGAAAAGGTTGACATGAATCCCTCAAAATATCAGAAGTCTAAAATGGAATCA
AGTTCGAAGACTGTTAAGCATGTGTACGTTCCACCTGGTACCTTAGCAAGGGGGCGAAGA
CAGAGCTTCAGAGCATTGGGTTCTATAAGAGTAAATGCTGAACAACGAGGTGATACACTT
TTTCCTCATGAAGAAGAAGAGATGCAGGGCACTCGGAGAAGTGAAATAAGGCTTTGTGAA
TCTGAAAAGGTAAAAAAACTGAGAGGAACGAATTGGTGTAAAAATGTTGCAGGACTCAAA
GTTGGAGAAAATGTTGCGCCTCCTAGTTTTGTTCAAACATTTGAAGGTGATACTCTTTTT
CCTCATGAAGAAGAAGAGATGCAGGGCACTCAGAGAAGTGAAATAAGGTCATGTGAATCT
GAAAAGGTAAAAAAGTGA

Peptide Sequence

PEP ID

XP_016481593.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107802577 isoform X11 [Nicotiana tabacum]
Sequence

MRHPTDSIAWKTFDELHQSFASEPRNVRLGLASDGFQSFGNSKTPYSIWPVVLIPYNLPP
WLCMKKENFILSMIIPGPESPGDAIDVYLQPLIEELKELWESGVKTFDASTKQNFVLHAS
LLWTINDFPAYANLSGWSTKGKLACPCCNKETHSIRLQNCKKQCYMGHRRFLPLNHKWRN
DKASFNGTKEKRLPPKQLSGDDILDQVADLYGLQLTKDPKKKIKISHESRGDNWNKKSIF
FDLPYWKALLLRHNLDVMHIEKNICDNILGTILNIKGKTKDTINTRLDLQAMNIRKELHP
IKIGDKYDLPTACYTLSPEEKDRFFSFLKNLKVPDGFSSNIFQCVNLKDRKISGLKSHDC
HVLLQHLLPLALRGMLCKSVCELLIELSLFFNVLGSKCLSVDELEQIDAQIPITECKLEK
VFPPTFFDVMEHLPIHLANEAKIAGPSQYRWMYPMERYIYFIKPFIRNRACAEGSIAEGY
LATECMTLCSRYIHTMETKFNRLERNYDGGIIESDGGLTIFCHPGRALRDGKPHKPDSNE
LEQAHIYILKNCDEIQPFLEKFSLTPIDTSQENSDMQFIGWLKEKVDMNPSKYQKSKMES
SSKTVKHVYVPPGTLARGRRQSFRALGSIRVNAEQRGDTLFPHEEEEMQGTRRSEIRLCE
SEKVKKLRGTNWCKNVAGLKVGENVAPPSFVQTFEGDTLFPHEEEEMQGTQRSEIRSCES
EKVKK

Transcript Sequence

Gene sequence data has not been registered.